PHATRDRAFT_44930 cog0439: biotin carboxylase (ATP-grasp_4)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44930	chr_5	cog0439: biotin carboxylase (ATP-grasp_4)	668146	669873	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0034

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0249	0.32	29000 800000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ATP-grasp_4		ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent...	cl17255	130.075	3.90E-35	254 - 443	specific	257854
ATP-grasp_4 superfamily		ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent...	-	130.075	3.90E-35	254 - 443	superfamily	266590

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
6805		Not available	242473	297416	237344	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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