PHATRDRAFT_44981 (PRK14811)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44981 chr_5 (PRK14811) 882685 883788 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0489

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
H2TH superfamily Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase (Fpg) is a DNA... - 61.1858 6.10E-12 154 - 237 superfamily 115485
Fapy_DNA_glyco Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase (Fpg) is... cl03119 56.0891 5.73E-10 3 - 140 specific 250400
FpgNei_N superfamily N-terminal domain of Fpg (formamidopyrimidine-DNA glycosylase, MutM)_Nei (endonuclease VIII) base-... - 56.0891 5.73E-10 3 - 140 superfamily 261594
PRK14811 formamidopyrimidine-DNA glycosylase; Provisional - 76.7582 2.75E-16 1 - 289 multi-dom 184831

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24744 Not available 149688 296487 454338 Cre10.g428433.t1.1 AT1G52500.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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