PHATRDRAFT_45020 ubiquitin ligase (SPRY)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45020 chr_5 ubiquitin ligase (SPRY) 1022678 1024456 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0354

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPRY SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit... cl02614 120.983 1.89E-32 332 - 446 specific 240451
SPRY superfamily SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit... - 120.983 1.89E-32 332 - 446 superfamily 261372
Telomere_Sde2_2 superfamily Telomere stability C-terminal; This short C-terminal domain is found in higher eukaryotes further... - 106.865 6.15E-28 530 - 589 superfamily 257634
Telomere_Sde2_2 superfamily Telomere stability C-terminal; This short C-terminal domain is found in higher eukaryotes further... - 106.865 6.15E-28 530 - 589 superfamily 257634
Telomere_Sde2 Telomere stability and silencing; Sde2 has been identified in fission yeast as an important factor... - 65.2626 1.80E-12 56 - 153 multi-dom 257463

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
7627 Not available Not available 1633 Not available Not available AT4G01000.1 362482

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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