PHATRDRAFT_45070 diguanylate cyclase (GAF)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45070 chr_6 diguanylate cyclase (GAF) 110065 111780 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0359

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0015
 0.37

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 51.2302 5.40E-08 448 - 505 superfamily 238125
ANK superfamily ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of... - 51.2302 5.40E-08 448 - 505 superfamily 238125
GAF GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... cl17456 54.8971 3.50E-09 126 - 259 specific 250726
GAF superfamily GAF domain; This domain is present in cGMP-specific phosphodiesterases, adenylyl and guanylyl... - 54.8971 3.50E-09 126 - 259 superfamily 266697
Ank_2 Ankyrin repeats (3 copies); Ankyrin repeats (3 copies). - 49.5619 1.44E-07 465 - 505 multi-dom 257303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 216012 301118 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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