PHATRDRAFT_45221 transmembrane protein (MS_channel superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45221 chr_6 transmembrane protein (MS_channel superfamily) 522931 526452 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0383

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0243
 0.22

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MS_channel superfamily Mechanosensitive ion channel; Two members of this protein family from M. jannaschii have been... - 66.451 2.45E-12 783 - 922 superfamily 250229
MscS Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] - 52.2302 2.68E-07 752 - 933 multi-dom 223740

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20567 Not available 202805 Not available Not available Not available AT5G19520.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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