PHATRDRAFT_45498 y1145_vibpa upf0225 protein vp1145 (COG3012)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45498	chr_7	y1145_vibpa upf0225 protein vp1145 (COG3012)	366517	367254	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0210

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0053	0.47	3600 3300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SEC-C superfamily		SEC-C motif; The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some...	-	44.5314	2.59E-06	90 - 143	superfamily	267742
COG3012		Uncharacterized protein conserved in bacteria [Function unknown]	-	78.2292	3.64E-18	88 - 231	multi-dom	225557

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
9471		Not available	273245	183321	196824	Cre05.g241639.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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