PHATRDRAFT_45542
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45542 chr_7 502347 503438 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0410

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0083
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NUFIP1 superfamily Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1); Proteins in this family have... - 38.4998 0.000287599 184 - 199 superfamily 256000
NUFIP1 superfamily Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1); Proteins in this family have... - 38.4998 0.000287599 184 - 199 superfamily 256000
zf-CCCH Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). cl11592 37.1496 0.000542517 284 - 308 specific 250023
zf-CCCH superfamily Zinc finger C-x8-C-x5-C-x3-H type (and similar); Zinc finger C-x8-C-x5-C-x3-H type (and similar). - 37.1496 0.000542517 284 - 308 superfamily 264437

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
1693 Not available 243590 Not available Not available Not available Not available 310807

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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