PHATRDRAFT_45684 ferredoxin (bacterial type ferredoxin family) (Fer4_15)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45684	chr_7	ferredoxin (bacterial type ferredoxin family) (Fer4_15)	922744	924586	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0028

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0166	0.21	5.9 50000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Fer4_15		4Fe-4S single cluster domain; 4Fe-4S single cluster domain.	cl19102	66.5554	1.04E-13	385 - 439	specific	257783
HCP_like superfamily		The HCP family of iron-sulfur proteins includes hybrid cluster protein (HCP), acetyl-CoA synthase (...	-	66.5554	1.04E-13	385 - 439	superfamily	267455
Fer4_21		4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to iron-sulfur...	-	39.5829	0.000219553	386 - 438	multi-dom	258835

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21679		Not available	170857	309415	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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