PHATRDRAFT_45764 (KAT11 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45764 chr_8 (KAT11 superfamily) 177548 182359 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0315

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KAT11 superfamily Histone acetylation protein; Histone acetylation is required in many cellular processes including... - 197.637 3.32E-55 872 - 1078 superfamily 261185
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 144.78 8.34E-40 582 - 670 superfamily 261339
zf-TAZ TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... cl02660 92.8119 5.79E-22 330 - 402 specific 251111
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 74.7087 1.05E-15 1494 - 1571 superfamily 261396
ZnF_TAZ TAZ zinc finger, present in p300 and CBP; TAZ zinc finger, present in p300 and CBP. cl02660 74.7087 1.05E-15 1494 - 1571 specific 214717
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 74.7087 1.05E-15 1494 - 1571 superfamily 261396
PHD PHD zinc finger; The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in... cl17445 46.4362 3.00E-06 767 - 809 specific 214584
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 46.4362 3.00E-06 767 - 809 superfamily 266687
ZZ superfamily Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ... - 43.1919 4.02E-05 1434 - 1477 superfamily 241760
COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure... - 86.3978 5.42E-18 480 - 684 multi-dom 227408

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
19899 Not available 168758 317554 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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