PHATRDRAFT_45795 cysteine endopeptidase (Peptidase_C1A)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45795	chr_8	cysteine endopeptidase (Peptidase_C1A)	300985	303051	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0367

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0211	0.25	12000 23000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Peptidase_C1A		Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)...	cl00298	227.507	1.29E-69	291 - 538	specific	239068
Peptidase_C1 superfamily		C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed...	-	227.507	1.29E-69	291 - 538	superfamily	260335
Inhibitor_I29		Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1...	cl07031	40.3051	0.000135559	69 - 136	specific	254690
Inhibitor_I29 superfamily		Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1...	-	40.3051	0.000135559	69 - 136	superfamily	263147

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
37824		Not available	162709	251601	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments