PHATRDRAFT_45816 heat shock transcription factor hsf1 (HSF_DNA-bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45816	chr_8	heat shock transcription factor hsf1 (HSF_DNA-bind)	366472	368626	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0401

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0189	0.30	6300 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HSF_DNA-bind		HSF-type DNA-binding; HSF-type DNA-binding.	cl12113	96.8002	9.88E-24	373 - 470	specific	249865
HSF_DNA-bind superfamily		HSF-type DNA-binding; HSF-type DNA-binding.	-	96.8002	9.88E-24	373 - 470	superfamily	264552
HSF_DNA-bind		HSF-type DNA-binding; HSF-type DNA-binding.	cl12113	96.8002	9.88E-24	373 - 470	specific	249865
HSF_DNA-bind superfamily		HSF-type DNA-binding; HSF-type DNA-binding.	-	96.8002	9.88E-24	373 - 470	superfamily	264552
Lin0512_fam superfamily		Conserved hypothetical protein (Lin0512_fam); This family consists of few members, broadly...	-	54.9476	3.22E-09	82 - 172	superfamily	142268

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	184780	138916	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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