PHATRDRAFT_45835 (Sterol-sensing superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45835	chr_8	(Sterol-sensing superfamily)	430612	435430	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0043

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0018	0.38	0.000056 9.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sterol-sensing superfamily		Sterol-sensing domain of SREBP cleavage-activation; Sterol regulatory element-binding proteins (...	-	102.667	1.23E-24	734 - 883	superfamily	256997
NosY		ABC-type transport system involved in multi-copper enzyme maturation, permease component [General...	cl19154	43.9931	0.000135963	1207 - 1391	specific	224196
Acyl_transf_3 superfamily		Acyltransferase family; This family includes a range of acyltransferase enzymes. This domain is...	-	43.9931	0.000135963	1207 - 1391	superfamily	267507

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	460413	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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