PHATRDRAFT_45848 (LSm14_N)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45848	chr_8	(LSm14_N)	457865	459140	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0297

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LSm14_N		Like-Sm protein 14, N-terminal domain; LSm14 (also known as RAP55) belongs to a family of Sm-like...	cl00259	110.755	1.01E-30	4 - 80	specific	212483
Sm_like superfamily		Sm and related proteins; The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form...	-	110.755	1.01E-30	4 - 80	superfamily	260307
FDF superfamily		FDF domain; The FDF domain, so called because of the conserved FDF at its N termini, is an entirely...	-	58.6677	1.86E-11	182 - 254	superfamily	255415

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	260741	318237	449431	Cre08.g378000.t1.2	AT1G26110.2	490738

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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