PHATRDRAFT_45989 chromosome 20 open reading frame 14 (PRP1_N)
Phaeodactylum tricornutum

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45989 chr_8 chromosome 20 open reading frame 14 (PRP1_N) 878783 881809 +
NCBI ID Ensembl Genomes exon ID
Not available Not available
Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0254
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 51.2268 9.16E-08 670 - 770 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 51.2268 9.16E-08 670 - 770 superfamily 238112
PRP1_N superfamily PRP1 splicing factor, N-terminal; This domain is specific to the N-terminal part of the prp1... - 126.261 2.88E-33 21 - 205 superfamily 253721
PRP1_N superfamily PRP1 splicing factor, N-terminal; This domain is specific to the N-terminal part of the prp1... - 126.261 2.88E-33 21 - 205 superfamily 253721
TPR_19 Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.8382 0.00345232 436 - 499 multi-dom 258697
TPR_16 Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.1292 0.00535557 638 - 701 multi-dom 257757
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
41117 Not available 270678 264093 419034 Cre14.g633650.t1.1 AT4G03430.1 557662
KEGG description KEGG Pathway
Not available Not available
Not available -
Log in to post comments