PHATRDRAFT_46041 dna binding nuclease (SnoaL_3)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_46041 chr_9 dna binding nuclease (SnoaL_3) 68186 70102 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0237

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0200
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SnoaL_3 SnoaL-like domain; This family contains a large number of proteins that share the SnoaL fold. cl09109 65.4426 1.05E-12 245 - 373 specific 257798
NTF2_like superfamily Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family... - 65.4426 1.05E-12 245 - 373 superfamily 263720
UVR superfamily UvrB/uvrC motif; UvrB/uvrC motif. - 35.0677 0.00598658 205 - 236 superfamily 251123
UVR superfamily UvrB/uvrC motif; UvrB/uvrC motif. - 35.0677 0.00598658 205 - 236 superfamily 251123

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22449 Not available 232703 201674 459493 Not available AT3G09250.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments