PHATRDRAFT_46212 cyst wall protein 1Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46212	chr_9	cyst wall protein 1	631019	633325	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0252

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0189	0.30	6300 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRRNT_2 superfamily		Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs...	-	35.0022	0.00838789	572 - 611	superfamily	254692
LRRNT_2 superfamily		Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs...	-	35.0022	0.00838789	572 - 611	superfamily	254692
LRR_8		Leucine rich repeat; Leucine rich repeat.	-	38.6729	0.000697511	663 - 723	multi-dom	258126

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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