PHATRDRAFT_46248 amp-dependent synthetase and ligase
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46248	chr_9	amp-dependent synthetase and ligase	718839	719779	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0131

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0090	0.41	0.000000000055 7600

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AFD_class_I superfamily		Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the...	-	45.0393	9.31E-06	60 - 154	superfamily	266508

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1880		Not available	151285	297742	Not available	Not available	Not available	355815

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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