PHATRDRAFT_46277 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46277	chr_9		796879	797742	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0412

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0056	0.30	3100 58000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UBL		Ubiquitin-like domain of UBL; UBLs function by remodeling the surface of their target proteins,...	cl00155	39.1726	6.53E-05	85 - 147	specific	176364
UBQ superfamily		Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins....	-	39.1726	6.53E-05	85 - 147	superfamily	260222

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22488		Not available	161550	116476	Not available	Not available	Not available	468286

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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