PHATRDRAFT_46317 photosystem-ii repair protein (LPA1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46317	chr_9	photosystem-ii repair protein (LPA1)	908667	909952	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0173

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF3493 superfamily		Protein of unknown function (DUF3493); This family of proteins is functionally uncharacterized....	-	51.5169	1.35E-08	114 - 193	superfamily	256787
LPA1		LOW PSII ACCUMULATION1; Provisional	-	74.5386	7.41E-15	109 - 377	multi-dom	215573

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
1291		Not available	252134	190644	Not available	Cre06.g266900.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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