PHATRDRAFT_46698 poly polymerase and dna-ligase zn-finger region family protein (zf-PARP)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46698	chr_11	poly polymerase and dna-ligase zn-finger region family protein (zf-PARP)	225455	227032	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0346

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0207	0.26	0.049 19

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-PARP superfamily		Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region; Poly(ADP-ribose) polymerase is an...	-	71.93	1.54E-15	9 - 60	superfamily	250026
zf-PARP superfamily		Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region; Poly(ADP-ribose) polymerase is an...	-	71.93	1.54E-15	9 - 60	superfamily	250026
HHH_8 superfamily		Helix-hairpin-helix domain; Helix-hairpin-helix domain.	-	46.3637	8.13E-07	378 - 448	superfamily	258853
HHH_8 superfamily		Helix-hairpin-helix domain; Helix-hairpin-helix domain.	-	46.3637	8.13E-07	378 - 448	superfamily	258853

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
9741		Not available	207777	289111	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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