PHATRDRAFT_46847 riken cdnaisoform cra_b (CTD_bind)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46847	chr_11	riken cdnaisoform cra_b (CTD_bind)	613120	614490	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0246	0.27	47 14

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CTD_bind		RNA polymerase II-binding domain; This domain binds to the phosphorylated C-terminal domain (CTD)...	cl02544	75.7125	3.81E-17	56 - 117	specific	252817
VHS_ENTH_ANTH superfamily		VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain....	-	75.7125	3.81E-17	56 - 117	superfamily	261334

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
20659		Not available	225364	66614	Not available	Not available	AT5G10060.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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