PHATRDRAFT_47094 atp dependent dna ligase family protein (DRMBL)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47094 chr_12 atp dependent dna ligase family protein (DRMBL) 384997 386508 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0387

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UBA Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... cl00153 39.7499 0.000121101 435 - 469 specific 238116
UBA superfamily Ubiquitin Associated domain. The UBA domain is a commonly occurring sequence motif in some members... - 39.7499 0.000121101 435 - 469 superfamily 260220
DRMBL superfamily DNA repair metallo-beta-lactamase; The metallo-beta-lactamase fold contains five sequence motifs.... - 100.849 1.37E-25 249 - 365 superfamily 254258
DRMBL superfamily DNA repair metallo-beta-lactamase; The metallo-beta-lactamase fold contains five sequence motifs.... - 100.849 1.37E-25 249 - 365 superfamily 254258
Lactamase_B Metallo-beta-lactamase superfamily; Apart from the beta-lactamases a number of other proteins... cl00446 47.5482 1.02E-06 37 - 140 specific 214854
Lactamase_B superfamily Metallo-beta-lactamase superfamily; Metallo-beta-lactamase superfamily. - 47.5482 1.02E-06 37 - 140 superfamily 260426

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 259696 307645 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments