PHATRDRAFT_47104 (A_NRPS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47104 chr_12 (A_NRPS) 408366 412469 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0244

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0126
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
A_NRPS The adenylation domain of nonribosomal peptide synthetases (NRPS); The adenylation (A) domain of... cl17068 397.97 3.40E-125 21 - 533 specific 213296
AFD_class_I superfamily Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the... - 397.97 3.40E-125 21 - 533 superfamily 266508
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 210.087 6.74E-61 1120 - 1365 superfamily 263925
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 210.087 6.74E-61 1120 - 1365 superfamily 263925
PP-binding Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached... cl09936 47.5643 1.62E-06 594 - 655 specific 249951
PP-binding superfamily Phosphopantetheine attachment site; A 4'-phosphopantetheine prosthetic group is attached... - 47.5643 1.62E-06 594 - 655 superfamily 263928
AA-adenyl-dom amino acid adenylation domain; This model represents a domain responsible for the specific... - 310.728 2.09E-94 34 - 453 multi-dom 233550
COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] - 229.447 1.31E-67 1120 - 1366 multi-dom 226674
NAD_binding_4 Male sterility protein; This family represents the C-terminal region of the male sterility protein... - 197.836 1.48E-56 732 - 970 multi-dom 254569

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22506 Not available 264672 250178 454037 Not available AT5G35930.1 348550

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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