PHATRDRAFT_47275 vacuolar protein sorting (Vps16_N superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47275 chr_13 vacuolar protein sorting (Vps16_N superfamily) 156891 160303 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0071

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Vps16_N superfamily Vps16, N-terminal region; This protein forms part of the Class C vacuolar protein sorting (Vps)... - 155.738 1.28E-40 80 - 545 superfamily 252829
Vps16_C superfamily Vps16, C-terminal region; This protein forms part of the Class C vacuolar protein sorting (Vps)... - 91.7668 4.57E-20 711 - 1048 superfamily 252828

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22008 Not available 256967 296870 Not available Cre03.g199311.t1.1 AT2G38020.1 530775

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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