PHATRDRAFT_47282 (Gaa1 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47282	chr_13	(Gaa1 superfamily)	175687	177519	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0118

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0023	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Gaa1 superfamily		Gaa1-like, GPI transamidase component; GPI (glycosyl phosphatidyl inositol) transamidase is a multi...	-	59.8901	1.02E-09	139 - 427	superfamily	252385

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23029		Not available	253146	65159	Not available	Not available	Not available	499924

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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