PHATRDRAFT_47287 tpr domain containing protein (TPR_12)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47287 chr_13 tpr domain containing protein (TPR_12) 191073 193635 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0004

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 41.982 5.68E-05 468 - 568 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 41.982 5.68E-05 468 - 568 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 41.982 5.68E-05 468 - 568 superfamily 238112
TPR superfamily Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF... - 41.982 5.68E-05 468 - 568 superfamily 238112
TPR_10 Tetratricopeptide repeat; Tetratricopeptide repeat. cl17452 36.0038 0.00334467 353 - 394 specific 257701
TPR_10 superfamily Tetratricopeptide repeat; Tetratricopeptide repeat. - 36.0038 0.00334467 353 - 394 superfamily 266693
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 45.4458 3.67E-06 487 - 568 multi-dom 257749
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 45.4458 3.67E-06 487 - 568 multi-dom 257749
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 45.4458 3.67E-06 487 - 568 multi-dom 257749
TPR_12 Tetratricopeptide repeat; Tetratricopeptide repeat. - 45.4458 3.67E-06 487 - 568 multi-dom 257749

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 234557 322381 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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