PHATRDRAFT_47289 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47289	chr_13		197089	198564	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0122

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0111	0.46	1.8 200000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MFS superfamily		The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that...	-	39.6045	0.00116355	39 - 219	superfamily	119392
MFS superfamily		The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that...	-	39.6045	0.00116355	39 - 219	superfamily	119392
MFS_1		Major Facilitator Superfamily; Major Facilitator Superfamily.	-	47.4145	4.60E-06	39 - 412	multi-dom	254360

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	296180	453325	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments