PHATRDRAFT_47432 riboflavin-specific deaminase-like protein (RibD)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47432	chr_13	riboflavin-specific deaminase-like protein (RibD)	608591	609436	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0361

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0006	0.56	780 24000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RibD		Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism]	cl17279	137.443	5.96E-39	60 - 277	specific	224896
RibD_C superfamily		RibD C-terminal domain; The function of this domain is not known, but it is thought to be involved...	-	137.443	5.96E-39	60 - 277	superfamily	266607

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
8679		Not available	180826	218725	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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