PHATRDRAFT_47449 lsu ribosomal protein l9p (rplI)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47449	chr_13	lsu ribosomal protein l9p (rplI)	648743	649453	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0132

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0034	0.35	0.0082 2500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_L9_C superfamily		Ribosomal protein L9, C-terminal domain; Ribosomal protein L9, C-terminal domain.	-	75.5338	8.06E-18	136 - 235	superfamily	252268
Ribosomal_L9_C superfamily		Ribosomal protein L9, C-terminal domain; Ribosomal protein L9, C-terminal domain.	-	75.5338	8.06E-18	136 - 235	superfamily	252268
Ribosomal_L9_N superfamily		Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, N-terminal domain.	-	39.7742	3.68E-05	78 - 123	superfamily	250502
Ribosomal_L9_N superfamily		Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, N-terminal domain.	-	39.7742	3.68E-05	78 - 123	superfamily	250502
rplI		50S ribosomal protein L9; Reviewed	-	100.929	1.88E-26	79 - 235	multi-dom	234659

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	263069	315645	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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