PHATRDRAFT_47620 plasma membrane ca2+-atpase isoform 4 (ATPase-IIB_Ca)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47620 chr_14 plasma membrane ca2+-atpase isoform 4 (ATPase-IIB_Ca) 303699 307330 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0292

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 180.457 4.37E-51 213 - 456 superfamily 249606
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 180.457 4.37E-51 213 - 456 superfamily 249606
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 141.215 7.27E-38 900 - 1081 superfamily 250058
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 141.215 7.27E-38 900 - 1081 superfamily 250058
Cation_ATPase_N Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... cl02930 59.4743 1.03E-10 130 - 190 specific 250059
Cation_ATPase_N superfamily Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 59.4743 1.03E-10 130 - 190 superfamily 261517
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 50.3049 2.01E-07 571 - 606 superfamily 257602
HAD superfamily haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase. - 38.8765 0.00366425 791 - 859 superfamily 267490
ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase; This model describes the P-type ATPase... - 727.721 0 109 - 1081 multi-dom 188151

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 247115

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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