PHATRDRAFT_47689 signal transduction histidine kinase (BaeS)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47689 chr_14 signal transduction histidine kinase (BaeS) 526846 529362 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0303

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0001
 0.41

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... cl00075 90.0134 3.71E-21 548 - 656 specific 238030
HATPase_c superfamily Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example:... - 90.0134 3.71E-21 548 - 656 superfamily 260175
REC Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... cl19078 67.6009 2.45E-13 713 - 820 specific 238088
REC superfamily Signal receiver domain; originally thought to be unique to bacteria (CheY, OmpR, NtrC, and PhoB),... - 67.6009 2.45E-13 713 - 820 superfamily 267431
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 47.2427 1.69E-06 174 - 266 superfamily 238075
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 47.2427 1.69E-06 174 - 266 superfamily 238075
HisKA Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... cl00080 44.896 5.96E-06 419 - 495 specific 119399
HisKA superfamily Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed... - 44.896 5.96E-06 419 - 495 superfamily 260177
PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... cl02459 37.7638 0.00149219 295 - 340 specific 214512
PAS_8 superfamily PAS domain; PAS domain. - 37.7638 0.00149219 295 - 340 superfamily 261295

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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