PHATRDRAFT_47701 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47701	chr_14		573838	577061	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0383

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0193	0.36	17 33000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	41.6766	5.17E-05	320 - 353	superfamily	113652
PT superfamily		PT repeat; This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a...	-	41.6766	5.17E-05	320 - 353	superfamily	113652
DUF3115 superfamily		Protein of unknown function (DUF3115); This eukaryotic family of proteins has no known function.	-	37.6494	0.00773799	467 - 608	superfamily	256409

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24684		Not available	267254	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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