PHATRDRAFT_47730 recombination and dna strand exchange inhibitor protein (ABC_ATPase superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_47730 chr_14 recombination and dna strand exchange inhibitor protein (ABC_ATPase superfamily) 664210 667467 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0480

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0054
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 230.597 2.60E-69 515 - 735 superfamily 266551
MutS_III MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... cl17822 61.6759 1.85E-10 340 - 493 specific 253074
MutS_III superfamily MutS domain III; This domain is found in proteins of the MutS family (DNA mismatch repair proteins... - 61.6759 1.85E-10 340 - 493 superfamily 266862
Smr Smr domain; This family includes the Smr (Small MutS Related) proteins, and the C-terminal region... cl02619 51.1087 7.76E-08 1008 - 1059 specific 250812
Smr superfamily Smr domain; This family includes the Smr (Small MutS Related) proteins, and the C-terminal region... - 51.1087 7.76E-08 1008 - 1059 superfamily 261374
ApoLp-III_like superfamily Apolipophorin-III and similar insect proteins; Exchangeable apolipoproteins play vital roles in the... - 39.489 0.000742818 739 - 877 superfamily 267466

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
10136 Not available 179483 317588 459295 Cre01.g040350.t1.1 AT1G65070.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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