PHATRDRAFT_47797 (Abi)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47797	chr_15	(Abi)	69148	70563	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0310

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0238	0.34	0.000000000099 38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Abi		CAAX protease self-immunity; Members of this family are probably proteases (after a isoprenyl group...	cl00558	58.7235	8.14E-11	239 - 335	specific	251346
Abi superfamily		CAAX protease self-immunity; Members of this family are probably proteases (after a isoprenyl group...	-	58.7235	8.14E-11	239 - 335	superfamily	260497
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	34.4457	0.00783486	384 - 453	superfamily	238008
EF-hand_7		EF-hand domain pair; EF-hand domain pair.	-	34.2817	0.00849537	392 - 455	multi-dom	257819

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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