PHATRDRAFT_47847 (Arrestin_N superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47847	chr_15	(Arrestin_N superfamily)	226631	228547	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0366

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0150	0.31	0.0000036 12000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Arrestin_N superfamily		Arrestin (or S-antigen), N-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication...	-	51.559	5.24E-08	21 - 151	superfamily	267643
Arrestin_C		Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication...	cl02844	46.5833	1.94E-06	206 - 357	specific	251513
Arrestin_C superfamily		Arrestin (or S-antigen), C-terminal domain; Ig-like beta-sandwich fold. Scop reports duplication...	-	46.5833	1.94E-06	206 - 357	superfamily	261473

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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