PHATRDRAFT_47894 metallo cofactor biosynthesis protein (COG0535)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_47894	chr_15	metallo cofactor biosynthesis protein (COG0535)	374203	374967	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0361

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0013	0.38	0.0000016 5200

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	45.017	5.01E-06	97 - 254	superfamily	100105
Radical_SAM superfamily		Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and...	-	45.017	5.01E-06	97 - 254	superfamily	100105
COG0535		Predicted Fe-S oxidoreductases [General function prediction only]	-	57.3345	6.62E-10	93 - 224	multi-dom	223609

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
7723		Not available	203380	287576	216024	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments