PHATRDRAFT_48135 (PHD)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48135	chr_16	(PHD)	296297	298819	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0388

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0058	0.36	0.63 560

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PHD		PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner...	cl17445	55.5788	1.09E-09	446 - 488	specific	250011
PHD superfamily		PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner...	-	55.5788	1.09E-09	446 - 488	superfamily	266687
ELM2 superfamily		ELM2 domain; The ELM2 (Egl-27 and MTA1 homology 2) domain is a small domain of unknown function. It...	-	36.436	0.00357442	284 - 336	superfamily	250629

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	262493	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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