PHATRDRAFT_48146 (RING)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48146 chr_16 (RING) 339040 343983 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0435

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 60.9224 2.69E-11 1298 - 1345 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 60.9224 2.69E-11 1298 - 1345 superfamily 266579
MttA_Hcf106 superfamily mttA/Hcf106 family; Members of this protein family are involved in a sec independent translocation... - 46.5389 3.69E-06 2 - 68 superfamily 260623
PRK04654 sec-independent translocase; Provisional - 44.8027 5.13E-05 1 - 138 multi-dom 135173

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261916 Not available 269881 286614 Not available Cre08.g381900.t1.2 AT4G28370.1 519898

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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