PHATRDRAFT_48178 (Ion_trans_2)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48178	chr_16	(Ion_trans_2)	426395	427824	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0372

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0205	0.32	0.32 1300

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ion_trans_2 superfamily		Ion channel; This family includes the two membrane helix type ion channels found in bacteria.	-	50.7165	3.20E-08	299 - 390	superfamily	254488
Ion_trans_2 superfamily		Ion channel; This family includes the two membrane helix type ion channels found in bacteria.	-	50.7165	3.20E-08	299 - 390	superfamily	254488
DZR		Double zinc ribbon; This family consists of a pair of zinc ribbon domains.	-	36.2533	0.00196396	435 - 457	multi-dom	257289

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3601		Not available	235042	151828	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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