PHATRDRAFT_48315 putative choline transporter (BCCT)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48315	chr_17	putative choline transporter (BCCT)	98797	101756	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0087

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0045	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
BCCT		BCCT family transporter; BCCT family transporter.	cl00569	389.187	8.59E-126	72 - 622	specific	251048
BCCT superfamily		BCCT family transporter; BCCT family transporter.	-	389.187	8.59E-126	72 - 622	superfamily	260506
PLAC8		PLAC8 family; This family includes the Placenta-specific gene 8 protein.	cl04722	40.4045	0.00022992	727 - 797	specific	252775
PLAC8 superfamily		PLAC8 family; This family includes the Placenta-specific gene 8 protein.	-	40.4045	0.00022992	727 - 797	superfamily	262267

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262307		Not available	277996	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments