PHATRDRAFT_48347 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48347	chr_17		181069	182798	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0307

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0193	0.36	17 33000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
F-box-like		F-box-like; This is an F-box-like family.	cl02535	38.2621	0.000436133	8 - 40	specific	257418
F-box superfamily		F-box domain; This domain is approximately 50 amino acids long, and is usually found in the N-...	-	38.2621	0.000436133	8 - 40	superfamily	261329
DUSP superfamily		DUSP domain; The DUSP (domain present in ubiquitin-specific protease) domain is found at the N-...	-	34.6414	0.0096002	308 - 360	superfamily	264555

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
21680		Not available	150962	155319	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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