PHATRDRAFT_48565 pt repeat family proteinPhaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48565	chr_18	pt repeat family protein	225749	227771	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0088

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0070	0.42

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PHA03160 superfamily		hypothetical protein; Provisional	-	44.6935	4.92E-05	238 - 402	superfamily	165431
FAM75 superfamily		FAM75 family; FAM75 family.	-	37.411	0.00881327	182 - 269	superfamily	258788
DUF3432		Domain of unknown function (DUF3432); This presumed domain is functionally uncharacterized. This...	-	42.8211	2.77E-05	192 - 287	multi-dom	152349

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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