PHATRDRAFT_48638 flap endonuclease 1 (PIN_FEN1)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48638 chr_18 flap endonuclease 1 (PIN_FEN1) 452679 454195 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0058

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0050
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PIN_FEN1 PIN domain of Flap Endonuclease-1, a structure-specific, divalent-metal-ion dependent, 5'... cl14812 356.429 1.53E-121 4 - 387 specific 189037
PIN_SF superfamily PIN (PilT N terminus) domain: Superfamily; PIN_SF The PIN (PilT N terminus) domain belongs to a... - 356.429 1.53E-121 4 - 387 superfamily 265458
H3TH_FEN1-Euk H3TH domain of Flap Endonuclease-1, a structure-specific, divalent-metal-ion dependent, 5&apos... cl14815 118.033 1.43E-32 226 - 333 specific 188627
H3TH_StructSpec-5'-nucleases superfamily H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in... - 118.033 1.43E-32 226 - 333 superfamily 265460
fen_arch flap structure-specific endonuclease; Endonuclease that cleaves the 5'-overhanging flap... - 299.549 3.94E-98 19 - 387 multi-dom 234306

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
269347 Not available 206746 260195 101628 Cre03.g145687.t1.1 AT5G26680.2 294028

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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