PHATRDRAFT_48694 homoserine dehydrogenase (PRK06349)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48694 chr_18 homoserine dehydrogenase (PRK06349) 630750 632063 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0119

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0173
 0.27

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Homoserine_dh superfamily Homoserine dehydrogenase; Homoserine dehydrogenase. - 214.62 2.80E-67 142 - 328 superfamily 250099
Homoserine_dh superfamily Homoserine dehydrogenase; Homoserine dehydrogenase. - 214.62 2.80E-67 142 - 328 superfamily 250099
NAD_binding_3 superfamily Homoserine dehydrogenase, NAD binding domain; This domain adopts a Rossmann NAD binding fold. The C... - 68.9012 3.02E-14 38 - 134 superfamily 251960
NAD_binding_3 superfamily Homoserine dehydrogenase, NAD binding domain; This domain adopts a Rossmann NAD binding fold. The C... - 68.9012 3.02E-14 38 - 134 superfamily 251960
ACT superfamily ACT domains are commonly involved in specifically binding an amino acid or other small ligand... - 42.1176 2.13E-05 358 - 433 superfamily 263730
PRK06349 homoserine dehydrogenase; Provisional - 405.61 4.27E-138 34 - 436 multi-dom 235783

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
29144 Not available Not available Not available Not available Not available Not available 284984

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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