PHATRDRAFT_48718 uncharacterized conserved membraneprobable transporter (DUF318 superfamily)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48718	chr_19	uncharacterized conserved membraneprobable transporter (DUF318 superfamily)	43959	45305	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0352

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0242	0.42	740 10000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF318 superfamily		Predicted permease; This family of integral membrane proteins are predicted to be permeases of...	-	100.85	3.78E-24	8 - 364	superfamily	266843
Vma12 superfamily		Endoplasmic reticulum-based factor for assembly of V-ATPase; The yeast vacuolar proton-...	-	37.3123	0.00170641	392 - 430	superfamily	256566

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments