PHATRDRAFT_48892 small-conductance mechanosensitive channel (MscS)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48892	chr_19	small-conductance mechanosensitive channel (MscS)	603213	604766	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0082

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0018	0.38	0.000056 9.6

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
MS_channel superfamily		Mechanosensitive ion channel; Two members of this protein family from M. jannaschii have been...	-	91.489	2.33E-21	262 - 450	superfamily	250229
MscS		Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	-	113.092	3.61E-28	203 - 451	multi-dom	223740

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	AT4G00290.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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