PHATRDRAFT_48912 c2h2 finger domain
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_48912 chr_19 c2h2 finger domain 663282 665789 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0396

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0083
 0.30

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... cl17238 36.2696 0.00445757 40 - 83 specific 238093
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 36.2696 0.00445757 40 - 83 superfamily 266579

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
25587 Not available 268123 292904 Not available Cre12.g528400.t1.1 AT3G62240.1 524072

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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