PHATRDRAFT_48958 spou protein (SpoU_methylase)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48958	chr_20	spou protein (SpoU_methylase)	146488	147957	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0221

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0085	0.45	490000 680000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SpoU_methylase		SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.	cl17307	102.202	9.84E-26	112 - 308	specific	249983
SpoU_methylase superfamily		SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.	-	102.202	9.84E-26	112 - 308	superfamily	266618

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
262325		Not available	195873	207974	235879	Cre09.g392950.t1.2	Not available	337829

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments