PHATRDRAFT_48977 mgc81046 protein (KDSR-like_SDR_c)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_48977	chr_20	mgc81046 protein (KDSR-like_SDR_c)	209946	211010	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0110

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0239	0.32	68 7100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
KDSR-like_SDR_c		3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR; These proteins...	cl09931	234.84	3.01E-75	54 - 277	specific	187643
NADB_Rossmann superfamily		Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD...	-	234.84	3.01E-75	54 - 277	superfamily	263925
adh_short		short chain dehydrogenase; This family contains a wide variety of dehydrogenases.	-	114.957	1.43E-30	56 - 226	multi-dom	249592

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3928		Not available	199849	299118	419354	Cre17.g702750.t1.2	AT3G06060.1	346972

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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