PHATRDRAFT_49037 af205360_1recombinant ubiquitin-somatotropin fusion protein (Ubiquitin)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49037	chr_20	af205360_1recombinant ubiquitin-somatotropin fusion protein (Ubiquitin)	376469	377291	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0083

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0064	0.31	77 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ubiquitin		Ubiquitin; Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric...	cl00155	167.354	3.20E-53	1 - 76	specific	176398
UBQ superfamily		Ubiquitin-like proteins; Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins....	-	167.354	3.20E-53	1 - 76	superfamily	260222
Sod_Ni superfamily		Nickel-containing superoxide dismutase; Nickel containing superoxide dismutase (NiSOD) is a...	-	110.118	1.63E-30	77 - 203	superfamily	263406

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	267154	206387	433456	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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